stringtie2-software
Table of Contents
stringtie2
Transcript assembly and quantification for RNA-Seq. A fork of the earlier tool of the same name by Johns Hopkins.
Information
- Version: 2.0.1
- Added: May, 2022
Usage
See versions which are available:
$ module avail stringtie2
Load one version into your environment and run it:
$ module load stringtie2/2.0.1 $ stringtie -h
Installation
Notes from the sysadmin during installation:
$ cd /tmp $ git clone https://github.com/mpertea/stringtie2 $ cd stringtie2 $ git checkout v2.0 $ make release $ sudo mkdir -p /export/apps/stringtie2/2.0.1/bin $ sudo cp stringtie /export/apps/stringtie2/2.0.1/bin
stringtie2-software.txt · Last modified: 2022/05/04 08:25 by aorth