mkatari-bioinformatics-august-2013-vcfregion
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Selecting a specific region in a vcf file
In order to obtain a subset of the vcf file based on genome region please use the following command. Original documentation here
module load tabix bgzip Genotypes2015.annotated.vcf tabix -p vcf /home/mkatari/Genotypes2015.annotated.vcf.gz tabix -p vcf /home/mkatari/Genotypes2015.annotated.vcf.gz Chromosome11:5532312-5532957
mkatari-bioinformatics-august-2013-vcfregion.txt · Last modified: 2015/05/21 13:43 by mkatari