MetaEuk is a modular toolkit designed for large-scale gene discovery and annotation in eukaryotic metagenomic contigs. MetaEuk combines the fast and sensitive homology search capabilities of MMseqs2 with a dynamic programming procedure to recover optimal exons sets. It reduces redundancies in multiple discoveries of the same gene and resolves conflicting gene predictions on the same strand.

• Latest Version: git-9818d1a5
• Added: January, 2022
• Link: https://github.com/soedinglab/metaeuk

See versions of metaeuk which are available:

$ module avail metaeuk

Load one version into your environment and run it:

$ module load metaeuk/git-9818d1a5
$ metaeuk

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://mmseqs.com/metaeuk/metaeuk-linux-sse41.tar.gz
$ sudo mkdir -p /export/apps/metaeuk/git-9818d1a5