htslib-software
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htslib-software [2015/03/27 08:55] – [HTSlib] joguya | htslib-software [2021/01/06 09:16] – aorth | ||
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===== Information ===== | ===== Information ===== | ||
- | * Version: 1.2.1 | + | * Latest |
* Added: March, 2015 | * Added: March, 2015 | ||
+ | * Updated: January, 2021 | ||
* Link: https:// | * Link: https:// | ||
===== Usage ===== | ===== Usage ===== | ||
- | === See versions of htslib which are available | + | See versions of htslib which are available: |
< | < | ||
- | === Load and run htslib === | + | Load one version into your environment |
- | < | + | < |
+ | $ tabix | ||
+ | $ bgzip</ | ||
===== Installation ====== | ===== Installation ====== | ||
Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | wget https:// | + | $ wget https:// |
- | tar -xvf 1.2.1.tar.gz | + | $ tar xf htslib-1.11.tar.bz2 |
- | cd htslib-1.2.1/ | + | $ cd htslib-1.11 |
- | scl enable | + | $ ./configure --enable-plugins |
- | sudo mkdir -p / | + | $ make |
- | sudo chown joguya: | + | $ sudo mkdir -p / |
- | autoreconf | + | $ sudo chown aorth / |
- | ./configure CC=clang --prefix=/ | + | $ make install |
- | make | + | $ sudo chown -R root:root / |
- | make install | + | |
- | sudo chown root:root / | + | |
- | </ | + |
htslib-software.txt · Last modified: 2022/06/23 09:29 by aorth