All Course material and resources taught on Day Nine shall be uploaded here
Presentation: Introduction to Metagenomics data analysisClick here to download
Tutorial: Introduction to Metagenomics Click here to download
Data: Type the below command to download the data
mkdir metagenomics
cd metagenomics
wget http://hpc.ilri.cgiar.org/beca/training/AdvancedBFX2014_2/course/F1.fasta
wget http://hpc.ilri.cgiar.org/beca/training/AdvancedBFX2014_2/course/F2.fasta
Lecture: MEGAN software Click here to download MEGAN
Tutorial: Download the MEGAN software Click here to download MEGAN
MEGAN Data: Clicks the link below to download the MEGAN data Clean pigs data
Medical waste data
GENOTYPING BY SEQUENCING
Tutorial: GBS Lecture Click to download
Tutorial: GBS Tutorial Click to download
Data: Type the below command to get the data for the tutorial
cd ~
mkdir gbs
cd gbs
cp -r /home/user24/ILRI_GBS/GBSpractice .
cd GBSpractice
YOU SHOULD SEE MANY FOLDERS IN THERE