trinotate-software
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Table of Contents
Trinotate
Trinotate is a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms.
Information
- Version: 2.0.2
- Added: June, 2015
- Updated: June, 2015
Usage
See versions of trinotate which are available:
$ module avail trinotate
NOTE<br/> Trinotate.sqlite Pre-generated Resource SQLite database that contains Uniprot(swissprot and uniref90)-related annotation information is available in /export/apps/trinotate/2.0.2/ folder. Therefore, you DO NOT need to download a new one!
Installation
Notes from the sysadmin during installation:
$ cd /tmp $ wget https://github.com/Trinotate/Trinotate/archive/v2.0.2.tar.gz $ tar -xvf v2.0.2.tar.gz $ cd Trinotate-2.0.2/ $ scl enable devtoolset-2 bash $ sudo mkdir -p /export/apps/trinotate/2.0.2 $ sudo cp -r . /export/apps/trinotate/2.0.2
trinotate-software.1437124221.txt.gz · Last modified: 2015/07/17 09:10 by joguya