User Tools

Site Tools


stringtie-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
Next revisionBoth sides next revision
stringtie-software [2014/11/06 14:53] aorthstringtie-software [2015/08/04 09:02] – [Installation] aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 0.98+  * Version: 1.0.2
   * Added: July, 2014   * Added: July, 2014
-  * Updated: November2014 +  * Updated: March2015 
-  * Link: http://ccb.jhu.edu/software/stringtie/+  * Link: https://ccb.jhu.edu/software/stringtie/
  
 ===== Usage ===== ===== Usage =====
  
 === See versions of stringtie which are available === === See versions of stringtie which are available ===
-<code>module avail stringtie</code>+<code>module avail stringtie</code> 
 + 
 +=== Load latest version and print help === 
 +<code>$ module load stringtie/1.0.2 
 +$ stringtie -h</code>
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>cd /tmp +<code>cd /tmp 
-wget http://ccb.jhu.edu/software/stringtie/dl/stringtie-0.98.tar.gz +wget http://ccb.jhu.edu/software/stringtie/dl/stringtie-1.0.4.tar.gz 
-cd stringtie-0.98 +$ scl enable devtoolset-3 bash 
-scl enable devtoolset-2.0 bash +$ tar xf stringtie-1.0.4.tar.gz 
-make release +cd stringtie-1.0.4 
-sudo mkdir -p /export/apps/stringtie/0.98/bin +scl enable devtoolset-bash 
-sudo cp stringtie /export/apps/stringtie/0.98/bin</code>+make release 
 +sudo mkdir -p /export/apps/stringtie/1.0.4/bin 
 +sudo cp stringtie /export/apps/stringtie/1.0.4/bin 
 +$ sudo cp LICENSE README /export/apps/stringtie/1.0.4</code>
stringtie-software.txt · Last modified: 2018/06/11 15:52 by aorth