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stringtie-software [2014/11/06 14:57] – [Installation] aorthstringtie-software [2015/03/16 07:44] aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 0.98+  * Version: 1.0.2
   * Added: July, 2014   * Added: July, 2014
-  * Updated: November2014 +  * Updated: March2015 
-  * Link: http://ccb.jhu.edu/software/stringtie/+  * Link: https://ccb.jhu.edu/software/stringtie/
  
 ===== Usage ===== ===== Usage =====
  
 === See versions of stringtie which are available === === See versions of stringtie which are available ===
-<code>module avail stringtie</code>+<code>module avail stringtie</code> 
 + 
 +=== Load latest version and print help === 
 +<code>$ module load stringtie/1.0.2 
 +$ stringtie -h</code>
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>cd /tmp +<code>cd /tmp 
-wget http://ccb.jhu.edu/software/stringtie/dl/stringtie-0.98.tar.gz +wget http://ccb.jhu.edu/software/stringtie/dl/stringtie-1.0.2.tar.gz 
-tar xf stringtie-0.98.tar.gz +tar xf stringtie-1.0.2.tar.gz  
-cd stringtie-0.98 +cd stringtie-1.0.2 
-scl enable devtoolset-2.0 bash +scl enable devtoolset-2 bash 
-make release +make release 
-sudo mkdir -p /export/apps/stringtie/0.98/bin +sudo mkdir -p /export/apps/stringtie/1.0.2/bin 
-sudo cp stringtie /export/apps/stringtie/0.98/bin</code>+sudo cp stringtie /export/apps/stringtie/1.0.2/bin 
 +$ sudo cp LICENSE README /export/apps/stringtie/1.0.2</code>
stringtie-software.txt · Last modified: 2018/06/11 15:52 by aorth