Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format.
See versions of seqtk which are available:
$ module avail seqtk
Load one version into your environment and run it:
$ module load seqtk/1.3 $ seqtk
Notes from the sysadmin during installation:
$ cd /tmp $ wget https://github.com/lh3/seqtk/archive/v1.3.tar.gz $ tar xf v1.3.tar.gz $ cd seqtk-1.3 $ scl enable devtoolset-7 bash $ make $ sudo mkdir -p /export/apps/seqtk/1.3/bin $ sudo cp seqtk /export/apps/seqtk/1.3/bin