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--- nextclade-software [2021/02/14 10:41] – created aorth
+++ nextclade-software [2021/09/06 10:23] – aorth
@@ Line 4: / Line 4: @@
 ===== Information =====
-  * Version: 0.12.0
+  * Version: 1.3.0
   * Added: February, 2021
-  * Link: https://github.com/nextstrain/nextclade
+  * Updated: September, 2021
+  * Link: https://github.com/nextstrain/nextclade/tree/master/packages/nextclade_cli
 ===== Usage =====
@@ Line 14: / Line 15: @@
 Load one version into your environment and run it:
-<code>$ module load nextclade/0.12.0
+<code>$ module load nextclade/1.3.0
-$ nextclade.js</code>
+$ nextclade</code>
 ===== Installation ======
 Notes from the sysadmin during installation:
-<code>$ sudo yum install rh-nodejs12-nodejs.x86_64
+<code>$ sudo mkdir -p /export/apps/nextclade/1.3.0/bin
-$ cd /tmp
+$ sudo wget https://github.com/nextstrain/nextclade/releases/download/1.3.0/nextclade-Linux-x86_64 -O /export/apps/nextclade/1.3.0/bin/nextclade
-$ git clone https://github.com/nextstrain/nextclade.git
+$ sudo chmod +x /export/apps/nextclade/1.3.0/bin/nextclade</code>
-$ cd nextclade
-$ git checkout 0.12.0
+__Note: nextclade was previously distributed as a Javascript program, but it seems to have been ported to C++ and is now a standalone executable.__
-$ cd packages/web
-$ cp .env.example .env
-$ export PATH=$PATH:/opt/rh/rh-nodejs12/root/usr/bin
-$ npm config set cache /tmp/aorth-npm
-$ npm install yarn
-$ npx yarn cli:prod:build
-$ sudo mkdir -p /export/apps/nextclade/0.12.0/bin
-$ sudo cp ../cli/dist/nextclade.js /export/apps/nextclade/0.12.0/bin</code>