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nanoplot-software

nanoplot

Plotting tool for long read sequencing data and alignments.

Information

Usage

See versions that are available:

$ module avail nanoplot

Load one version into your environment and run it:

$ module load nanoplot/1.42.0
$ NanoPlot

Installation

Notes from the sysadmin during installation.

$ module load python/3.10
$ sudo mkdir -p /export/apps/nanoplot/1.42.0
$ sudo chown aorth /export/apps/nanoplot/1.42.0
$ python -m venv /export/apps/nanoplot/1.42.0
$ source /export/apps/nanoplot/1.42.0/bin/activate
$ pip install --upgrade wheel setuptools pip
$ pip install NanoPlot==1.42.0
$ sudo chown -R root:root  /export/apps/nanoplot/1.42.0
nanoplot-software.txt · Last modified: 2025/04/29 08:18 by aorth