MUMmer is a versatil alignment tool for DNA and protein sequences.

• Latest version: 3.23
• Added: October, 2010
• Updated: September, 2017
• Link: http://mummer.sourceforge.net/

See versions of MUMmer which are available:

$ module avail MUMmer

Load one version into your environment:

$ module load MUMmer/3.23

Notes from the sysadmin during installation:

$ cd /tmp
$ wget 'https://downloads.sourceforge.net/project/mummer/mummer/3.23/MUMmer3.23.tar.gz?r=https%3A%2F%2Fsourceforge.net%2Fprojects%2Fmummer%2F&ts=1505571212&use_mirror=netix' -O MUMmer3.23.tar.gz
$ tar xf MUMmer3.23.tar.gz
# the make process hard-codes some perl paths, so copy the source to the place where you want the software installed before compiling
$ sudo mv MUMmer3.23 /export/apps/MUMmer/3.23
$ cd /export/apps/MUMmer/3.23
$ scl enable devtoolset-4 bash
$ make CPPFLAGS="-O3 -DSIXTYFOURBITS"
$ sudo chown -R root:root /export/apps/MUMmer/3.23