A versatile pairwise aligner for genomic and spliced nucleotide sequences.

• Latest version: 2.22
• Added: November, 2018
• Updated: August, 2021
• Link: https://lh3.github.io/minimap2/

See versions of minimap2 that are available:

$ module avail minimap2

Load one version into your environment and run it:

$ module load minimap2/2.22
$ minimap2

Notes from the sysadmin during installation:

$ wget https://github.com/lh3/minimap2/releases/download/v2.22/minimap2-2.22_x64-linux.tar.bz2
$ tar xf minimap2-2.22_x64-linux.tar.bz2
$ sudo mkdir -p /export/apps/minimap2/2.22/bin
$ cd minimap2-2.22_x64-linux
$ sudo cp README.md LICENSE.txt /export/apps/minimap2/2.22
$ sudo cp paftools.js k8 minimap2 /export/apps/minimap2/2.22/bin