minimap2-software
Table of Contents
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences.
Information
- Latest version: 2.24
- Added: November, 2018
- Updated: February, 2023
Usage
See versions that are available:
$ module avail minimap2
Load one version into your environment and run it:
$ module load minimap2/2.24 $ minimap2
Installation
Notes from the sysadmin during installation:
$ cd /tmp $ wget https://github.com/lh3/minimap2/releases/download/v2.24/minimap2-2.24.tar.bz2 $ tar xf minimap2-2.24.tar.bz2 $ cd minimap2-2.24 $ make $ sudo mkdir -p /export/apps/minimap2/2.24/{bin,include,lib} $ sudo cp minimap2 /export/apps/minimap2/2.24/bin $ sudo cp *.h /export/apps/minimap2/2.24/include $ sudo cp libminimap2.a /export/apps/minimap2/2.24/lib $ sudo cp LICENSE.txt README.md FAQ.md code_of_conduct.md NEWS.md /export/apps/minimap2/2.24
Note: I compiled this instead of using the pre-compiled binaries because I wanted to include the headers and static library for use by other programs.
minimap2-software.txt · Last modified: 2023/02/21 12:54 by aorth