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igvtools-software

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Integrative Genomics Viewer (IGV) Tools

Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.

Information

Usage

See which versions of igvtools are available:

$ module avail igvtools

Load one version into your environment and run it:

$ module load igvtools/2.3.98
$ igv.sh

Installation

Notes from the sysadmin during installation:

$ wget http://data.broadinstitute.org/igv/projects/downloads/2.4/IGV_2.4.5.zip
$ sudo mkdir -p /export/apps/igv/2.4.5
$ sudo cp -r IGV_2.4.5/*  /export/apps/igv/2.4.5
$ sudo chmod -x /export/apps/igv/2.4.5/igv.{bat,command}
igvtools-software.1514300110.txt.gz · Last modified: 2017/12/26 14:55 by aorth