hpg-variant-software
Table of Contents
HPG Variant
HPG Variant is a tool for fast, memory-efficient counting of k-mers in DNA
Information
- Version: 1.0
- Added: April, 2015
Usage
See versions of hpg-variant which are available
$ module avail hpg-variant
Load and run hpg-variant
$ module load hpg-variant $ hpg-var-effect $ hpg-var-gwas $ hpg-var-vcf
Installation
Notes from the sysadmin during installation:
cd /tmp scl enable devtoolset-2 bash git clone https://github.com/opencb/hpg-variant.git git checkout v1.0 git submodule update --init scons -j4 sudo mkdir -p /export/apps/hpg-variant/1.0 sudo cp -r . /export/apps/hpg-variant/1.0
hpg-variant-software.txt · Last modified: 2015/04/02 13:20 by joguya