flexbar-software
Table of Contents
Flexbar
flexbar is a flexible barcode and adapter processing for next-generation sequencing platforms.
Information
- Version: 2.7.0
- Added: May, 2016
Usage
See which versions of flexbar are available:
$ module avail flexbar
Load flexbar
$ module load flexbar/2.7.0
Installation
Notes from the sysadmin during installation:
$ cd /tmp $ scl enable devtoolset-2 bash $ wget https://github.com/seqan/flexbar/archive/v2.7.0.tar.gz $ tar -xvf v2.7.0.tar.gz $ cd flexbar-2.7.0/ $ wget https://github.com/seqan/seqan/releases/download/seqan-v2.1.1/seqan-library-2.1.1.zip $ unzip seqan-library-2.1.1.zip $ echo "include_directories( /tmp/flexbar-2.7.0/seqan-library-2.1.1/include )" >> CMakeLists.txt $ sudo yum install tbb-devel.x86_64 $ cmake . $ make $ sudo mkdir -p /export/apps/flexbar/2.7.0 $ sudo cp flexbar /export/apps/flexbar/2.7.0
flexbar-software.txt · Last modified: 2016/05/16 13:02 by joguya