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dnaapler-software

dnaapler

Dnaapler is a simple tool that reorients complete circular microbial genomes.

Information

Usage

See versions that are available:

$ module avail dnaapler

Load one version into your environment and run it:

$ module load dnaapler/1.2.0
$ dnaapler

Installation

Notes from the sysadmin during installation.

<code>$ sudo mkdir -p /export/apps/dnaapler/1.2.0 $ sudo chown -R aorth /export/apps/dnaapler/1.2.0 $ module load python/3.10 $ python -m venv /export/apps/dnaapler/1.2.0/.venv $ source /export/apps/dnaapler/1.2.0/.venv/bin/activate $ python -m pip install -U pip setuptools wheel $ python -m pip install dnaapler==1.2.0 $ sudo chown -R root:root /export/apps/dnaapler/1.2.0</p>

dnaapler-software.txt · Last modified: 2025/05/13 09:52 by aorth