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changeo-software [2017/05/31 08:25] aorthchangeo-software [2017/05/31 08:29] aorth
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 $ . /export/apps/changeo/0.3.5/bin/activate $ . /export/apps/changeo/0.3.5/bin/activate
 $ pip install -U pip setuptools $ pip install -U pip setuptools
-$ pip install -U Cython 
 $ pip install -U numpy scipy pandas biopython $ pip install -U numpy scipy pandas biopython
-$ pip install -U presto 
 $ pip install -U changeo $ pip install -U changeo
 $ sudo chown -R root:root /export/apps/changeo/0.3.5</code> $ sudo chown -R root:root /export/apps/changeo/0.3.5</code>
 +
 +Change-O requires presto, so either install it and all of its dependencies here as well, or just make sure the Change-O module also loads presto.
changeo-software.txt · Last modified: 2022/04/25 15:14 by aorth