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Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome.



See versions of bwa which are available:

$ module avail bwa

Load one version into your environment and run it:

$ module load bwa/0.7.17


Notes from the sysadmin during installation:

$ cd /tmp
$ wget
$ tar xf bwa-0.7.17.tar.bz2 
$ cd bwa-0.7.17
$ make
$ sudo mkdir -p /export/apps/bwa/0.7.17/{bin,share/man/man1}
$ sudo cp bwa *.pl /export/apps/bwa/0.7.17/bin
$ sudo cp -rv bwakit/ /export/apps/bwa/0.7.17
bwa-software.txt · Last modified: 2020/06/17 07:04 by aorth