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using-the-cluster [2020/03/19 12:13] – [Using the Cluster] jean-bakausing-the-cluster [2020/03/19 12:14] – jean-baka
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 ====== Using the Cluster ====== ====== Using the Cluster ======
 ILRI's high-performance computing "cluster" is currently composed of 7 dedicated machines: ILRI's high-performance computing "cluster" is currently composed of 7 dedicated machines:
-  * hpc: main login node, "master" of the cluster +  * **hpc**: main login node, "master" of the cluster 
-  * taurus, compute2, compute04: used for batch and interactive jobs like BLAST, structure, R, etc (compute04 has lots of disk space under its ''/var/scratch'') +  * **taurus**, **compute2**, **compute04**: used for batch and interactive jobs like BLAST, structure, R, etc (compute04 has lots of disk space under its ''/var/scratch'') 
-  * mammoth: used for high-memory jobs like genome assembly (mira, newbler, abyss, etc) +  * **mammoth**: used for high-memory jobs like genome assembly (mira, newbler, abyss, etc) 
-  * compute03: fast CPUs, but few of them  +  * **compute03**: fast CPUs, but few of them  
-  * compute05: batch jobs, has the fastest processors (AMD EPYC)+  * **compute05**: batch jobs, has the fastest processors (AMD EPYC)
  
 To get access to the cluster you should talk to Jean-Baka (he sits in BecA). Once you have access you should read up on [[Using SLURM|SLURM]] so you can learn how to submit jobs to the cluster. To get access to the cluster you should talk to Jean-Baka (he sits in BecA). Once you have access you should read up on [[Using SLURM|SLURM]] so you can learn how to submit jobs to the cluster.
using-the-cluster.txt · Last modified: 2023/01/06 06:14 by aorth