User Tools

Site Tools


soapdenovo2-software

This is an old revision of the document!


SOAPdenovo2

SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes.

Information

Usage

See versions of SOAPdenovo2 which are available:

$ module avail SOAPdenovo2

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ git clone https://github.com/aquaskyline/SOAPdenovo2.git
$ git checkout r241
$ make
$ sudo mkdir -p /export/apps/SOAPdenovo2/r241/bin
$ sudo cp SOAPdenovo-* /export/apps/SOAPdenovo2/r241/bin
$ sudo cp LICENSE VERSION /export/apps/SOAPdenovo2/r241
soapdenovo2-software.1512569809.txt.gz · Last modified: 2017/12/06 14:16 by aorth