snpeff-software
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snpeff-software [2023/06/12 17:38] – aorth | snpeff-software [2023/06/12 17:49] (current) – [Usage] aorth | ||
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- | ====== SnpEff | + | ====== SnpEff ====== |
SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes). | SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of variants on genes (such as amino acid changes). | ||
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Load one into your environment and run it: | Load one into your environment and run it: | ||
< | < | ||
- | snpeff</ | + | $ snpeff</ |
===== Installation ====== | ===== Installation ====== | ||
Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | + | $ wget https:// | |
+ | $ sudo mkdir -p / | ||
+ | $ sudo cp -r snpEff/* / |
snpeff-software.1686591502.txt.gz · Last modified: 2023/06/12 17:38 by aorth