snakemake-software
This is an old revision of the document!
Table of Contents
Snakemake
The Snakemake workflow management system is a tool to create reproducible and scalable data analyses
Information
- Version: 5.7.0
- Added: October, 2019
Usage
See versions of snakemake which are available:
$ module avail snakemake
Load one version into your environment and run it:
$ module load snakemake/5.7.0 $ snakemake
Installation
Notes from the sysadmin during installation:
$ sudo mkdir -p /export/apps/snakemake/5.7.0 $ sudo chown aorth /export/apps/snakemake/5.7.0 $ python3.6 -m venv /export/apps/snakemake/5.7.0 $ source /export/apps/snakemake/5.7.0/bin/activate $ pip install snakemake $ sudo chown -R root:root /export/apps/snakemake/5.7.0
snakemake-software.1570526077.txt.gz · Last modified: 2019/10/08 09:14 by aorth