User Tools

Site Tools


seqtk-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
seqtk-software [2018/02/21 07:21] aorthseqtk-software [2025/05/06 09:46] (current) aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 1.2-r102+  * Version: 1.4
   * Added: February, 2018   * Added: February, 2018
 +  * Updated: May, 2025
   * Link: https://github.com/lh3/seqtk   * Link: https://github.com/lh3/seqtk
  
 ===== Usage ===== ===== Usage =====
  
-See versions of seqtk which are available:+See which versions are available:
 <code>$ module avail seqtk</code> <code>$ module avail seqtk</code>
  
 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load seqtk/1.2-r102+<code>$ module load seqtk/1.4
 $ seqtk</code> $ seqtk</code>
  
Line 21: Line 22:
  
 <code>$ cd /tmp <code>$ cd /tmp
-git clone https://github.com/lh3/seqtk.git +wget https://github.com/lh3/seqtk/archive/refs/tags/v1.4.tar.gz 
-$ cd seqtk+$ tar xf v1.4.tar.gz  
 +$ cd seqtk-1.4
 $ make $ make
-$ sudo mkdir -p /export/apps/seqtk/1.2-r102/bin +$ sudo mkdir -p /export/apps/seqtk/1.4/bin 
-$ sudo cp seqtk /export/apps/seqtk/1.2-r102/bin</code>+$ sudo cp seqtk /export/apps/seqtk/1.4/bin</code>
seqtk-software.1519197709.txt.gz · Last modified: by aorth