RSEM(RNA-Seq by Expectation-Maximization) is an accurate quantification of gene and isoform expression from RNA-Seq data.

• Version: 1.2.21
• Added: February, 2015
• Updated: July, 2015
• Link: http://deweylab.biostat.wisc.edu/rsem/

• Show all available versions of RSEM

  module avail RSEM

• Load RSEM module:

  module load RSEM/1.2.21

• Download & build/compile it

  wget http://deweylab.biostat.wisc.edu/rsem/src/rsem-1.2.21.tar.gz
  tar -xvf rsem-1.2.21.tar.gz 
  cd rsem-1.2.21
  scl enable devtoolset-2 bash
  module load bowtie2
  make
  sudo mkdir /export/apps/RSEM/1.2.21/
  sudo cp -r . /export/apps/RSEM/1.2.21/