ray-software
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Table of Contents
Ray
Ray is a parallel software that computes de novo genome assemblies with next-generation sequencing data. Ray is written in C++ and can run in parallel on numerous interconnected computers using the message-passing interface (MPI) standard.
Information
- Version: 2.3.1
- Added: August, 2014
- Max K-mer length: 32 (default at compile time)
- Default K-mer lenght: 21
Usage
See versions of ray which are available
module avail ray
See the built-in help
Ray -help | less
Installation
Notes from the sysadmin during installation:
cd /tmp git clone https://github.com/sebhtml/RayPlatform.git git clone https://github.com/sebhtml/ray.git cd ray git checkout v2.3.1 scl enable devtoolset-1.1 bash module load openmpi/1.8.2 make PREFIX=/export/apps/ray/2.3.1 HAVE_LIBZ=y HAVE_LIBBZ2=y strip Ray sudo mkdir -p /export/apps/ray/2.3.1 sudo chown -R aorth:aorth /export/apps/ray/2.3.1 make install sudo chown -R root:root /export/apps/ray/2.3.1
ray-software.1409581389.txt.gz · Last modified: 2014/09/01 14:23 by aorth