raxml-software
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raxml-software [2014/12/08 10:06] – joguya | raxml-software [2014/12/08 10:12] – [Installation Notes] joguya | ||
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sudo mkdir -p / | sudo mkdir -p / | ||
sudo cp raxmlHPC-* / | sudo cp raxmlHPC-* / | ||
+ | ===== RAxML 8.1.9 ===== | ||
+ | Information: | ||
+ | * Version: 8.1.9 | ||
+ | * Added: December, 2014 | ||
+ | * Link: https:// | ||
+ | |||
+ | ==== Installation Notes ==== | ||
+ | * Download pandaseq 2.8.1, create version specific dir in / | ||
+ | git clone https:// | ||
+ | cd standard-RAxML | ||
+ | scl enable devtoolset-1.1 bash | ||
+ | git checkout v8.1.9 | ||
+ | make -f Makefile.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.SSE3.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.AVX.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.PTHREADS.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.AVX.PTHREADS.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.SSE3.PTHREADS.gcc | ||
+ | rm *.o | ||
+ | module load openmpi/ | ||
+ | make -f Makefile.MPI.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.SSE3.MPI.gcc | ||
+ | rm *.o | ||
+ | make -f Makefile.AVX.MPI.gcc | ||
+ | rm *.o | ||
+ | sudo mkdir -p / | ||
+ | sudo cp raxmlHPC* / | ||
+ | </ | ||
+ | |||
+ | * RAxML/8.1.9 module file:< | ||
+ | ##################################################################### | ||
+ | ## | ||
+ | ## RAxML Modulefile | ||
+ | ## by James Oguya, < | ||
+ | ## December, 2014 | ||
+ | ## | ||
+ | |||
+ | set | ||
+ | set | ||
+ | set | ||
+ | set | ||
+ | |||
+ | conflict | ||
+ | |||
+ | prepend-path | ||
+ | </ | ||
+ | |||
+ |
raxml-software.txt · Last modified: 2018/09/16 07:45 by aorth