quast-software
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
quast-software [2015/06/09 16:36] – aorth | quast-software [2015/08/04 20:55] – aorth | ||
---|---|---|---|
Line 1: | Line 1: | ||
====== quast ====== | ====== quast ====== | ||
+ | QUAST(QUality ASsessment Tool)evaluates genome assemblies by computing various metrics. | ||
===== Information ===== | ===== Information ===== | ||
- | * Version: | + | * Latest |
* Added: September, 2014 | * Added: September, 2014 | ||
+ | * Updated: July, 2015 | ||
* Link: http:// | * Link: http:// | ||
Line 15: | Line 16: | ||
Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | $ wget 'http:// | + | $ tar -xvf quast-3.0.tar.gz |
- | $ tar xf quast-2.3.tar.gz | + | $ sudo mkdir -p / |
- | $ sudo mkdir -p / | + | $ sudo cp -rv quast-3.0/* / |
- | $ sudo cp -rv quast-2.3 / | + | $ sudo chown -R joguya:joguya |
- | $ sudo chown -R aorth:aorth / | + | $ cd / |
- | $ cd / | + | $ module load python/2.7.8 |
- | $ module load python/2.7.6 | + | |
- | $ ./ | + | |
$ cd libs/ | $ cd libs/ | ||
$ make | $ make | ||
- | $ cd ../.. | + | $ cd - |
$ ./ | $ ./ | ||
- | $ sudo chown -R root:root / | + | $ sudo chown -R root:root / |
===== Running ===== | ===== Running ===== |
quast-software.txt · Last modified: 2020/04/07 08:27 by aorth