prokka-software
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Table of Contents
PROKKA
Prokka is a software tool for the rapid annotation of prokaryotic genomes.
Information
- Version: 1.11
- Added: February, 2017
Usage
See which versions of Prokka are available:
$ module avail prokka
Load prokka
$ module load prokka/1.11
Installation
Notes from the sysadmin during installation:
$ cd /tmp/ $ wget -qO- https://github.com/tseemann/prokka/archive/v1.11.tar.gz | tar xzv $ cd prokka-1.11/ $ scl enable devtoolset-3 bash $ module load perl/5.22.3 $ cpanm SWISS::Entry SWISS::KW XML::Simple $ sed -i 's#/usr/bin/perl.*#/usr/bin/env perl#' bin/* $ sudo mkdir -p /export/apps/prokka/1.11 $ sudo cp -rv . /export/apps/prokka/1.11/
prokka-software.1487589554.txt.gz · Last modified: 2017/02/20 11:19 by joguya