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nextflow-software [2020/02/05 15:51]
aorth created
nextflow-software [2021/03/18 09:57] (current)
aorth
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 ===== Information ===== ===== Information =====
  
-  * Version: 19.10.0+  * Version: 20.10.0
   * Added: February, 2020   * Added: February, 2020
 +  * Updated: March, 2021
   * Link: https://github.com/nextflow-io/nextflow   * Link: https://github.com/nextflow-io/nextflow
  
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 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load kat/19.10.0+<code>$ module load nextflow/20.10.0
 $ nextflow</code> $ nextflow</code>
  
 See [[https://www.nextflow.io/docs/latest/index.html|the nextflow documentation]] for information about how to use it. See [[https://www.nextflow.io/docs/latest/index.html|the nextflow documentation]] for information about how to use it.
 +
 +**Note:**: by default nextflow writes temporary data to ''/tmp'', which may not have adequate storage space depending on your pipeline. Please configure your workflow to use ''/var/scratch'' instead. See the configuration link above for information about how to do that. 
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ sudo mkdir -p /export/apps/nextflow/19.10.0 +<code>$ sudo mkdir -p /export/apps/nextflow/20.10.0/bin 
-$ sudo wget https://github.com/nextflow-io/nextflow/releases/download/v19.10.0/nextflow-19.10.0-all -O /export/apps/nextflow/19.10.0/bin/nextflow +$ sudo wget https://github.com/nextflow-io/nextflow/releases/download/v20.10.0/nextflow-20.10.0-all -O /export/apps/nextflow/20.10.0/bin/nextflow 
-$ sudo chmod +x /export/apps/nextflow/19.10.0/bin/nextflow</code>+$ sudo chmod +x /export/apps/nextflow/20.10.0/bin/nextflow</code>
nextflow-software.1580917908.txt.gz · Last modified: 2020/02/05 15:51 by aorth