ILRI Research Computing

This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong.

====== MultiQC ======
MultiQC is a reporting tool that parses summary statistics from results and log files generated by other bioinformatics tools. MultiQC doesn't run other tools for you - it's designed to be placed at the end of analysis pipelines or to be run manually when you've finished running your tools.

===== Information =====

  * Version: 1.12
  * Added: February, 2018
  * Updated: March, 2022
  * Link: http://multiqc.info/docs/

===== Usage =====

See which versions are available:
<code>$ module avail multiqc</code>

Load one version into your environment and run it:
<code>$ module load multiqc/1.12
$ multiqc</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ cd /tmp
$ sudo mkdir -p /export/apps/multiqc/1.12
$ sudo chown aorth /export/apps/multiqc/1.12
$ module load python/3.9
$ python3 -m venv /export/apps/multiqc/1.12
$ source /export/apps/multiqc/1.12/bin/activate
$ pip install multiqc==1.12
$ sudo chown -R root:root /export/apps/multiqc/1.12</code>