mothur-software
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Table of Contents
mothur
mothur offers the ability to go from raw sequences to the generation of visualization tools to describe α and β diversity.
Information
- Latest version: 1.39.1
- Updated: February, 2017
- Added: October, 2011
- Link: http://www.mothur.org/
Usage
See versions of mothur which are available:
$ module avail mothur
Load and run mothur:
$ module load mothur/1.39.1 $ mothur
Installation
Notes from the sysadmin during installation:
- install mothur/1.39.1 $ cd /tmp $ wget -qO- https://github.com/mothur/mothur/archive/v1.39.1.tar.gz | tar xvz $ cd mothur-1.39.1/ $ sudo mkdir -p /export/apps/mothur/1.39.1/ $ sudo chown -R joguya:joguya /export/apps/mothur/1.39.1/ $ scl enable devtoolset-3 bash $ sed -i 's#^BOOST_LIBRARY_DIR=.*$#BOOST_LIBRARY_DIR=/export/apps/boost/1.50.0/lib#g;s#^BOOST_INCLUDE_DIR=.*$#BOOST_INCLUDE_DIR=/export/apps/boost/1.50.0/include#g' Makefile $ make -j4 $ sudo chown -R root:root /export/apps/mothur/1.39.1/
mothur-software.1486536408.txt.gz · Last modified: 2017/02/08 06:46 by joguya