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mkatari-bioinformatics-august-2013 [2013/08/23 14:50] – mkatarimkatari-bioinformatics-august-2013 [2013/08/23 16:29] – mkatari
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   * Data cleaning and working with packages -- [[http://www.bioconductor.org/help/workflows/high-throughput-sequencing/|Next-gen workflow]] -- [[http://bioconductor.org|Bioconductor]] -- [[https://docs.google.com/file/d/0B172nc4dAaaOMG44Zk1BT2NFdkU/edit?usp=sharing| Example file]] -- -- [[mkatari-bioinformatics-august-2013-cleanSNP |Clean SNP data]] -- -- [[mkatari-bioinformatics-august-2013-convert-SNP|Convert SNP File format]]   * Data cleaning and working with packages -- [[http://www.bioconductor.org/help/workflows/high-throughput-sequencing/|Next-gen workflow]] -- [[http://bioconductor.org|Bioconductor]] -- [[https://docs.google.com/file/d/0B172nc4dAaaOMG44Zk1BT2NFdkU/edit?usp=sharing| Example file]] -- -- [[mkatari-bioinformatics-august-2013-cleanSNP |Clean SNP data]] -- -- [[mkatari-bioinformatics-august-2013-convert-SNP|Convert SNP File format]]
   * Differential Gene Expression using DESeq -- [[mkatari-bioinformatics-august-2013-DESeq|DESeq]]   * Differential Gene Expression using DESeq -- [[mkatari-bioinformatics-august-2013-DESeq|DESeq]]
 +  * Clustering -- [[https://docs.google.com/file/d/0B172nc4dAaaOaC16N25EU01iXzg/edit?usp=sharing|ppt]]
   * GeneSet Enrichment Analysis -- [[https://docs.google.com/file/d/0B172nc4dAaaOcnVlM25nWk1ZVWs/edit?usp=sharing|ppt]] -- [[mkatari-bioinformatics-august-2013-LoadingPhytozome|Loading Phytozome data]]   * GeneSet Enrichment Analysis -- [[https://docs.google.com/file/d/0B172nc4dAaaOcnVlM25nWk1ZVWs/edit?usp=sharing|ppt]] -- [[mkatari-bioinformatics-august-2013-LoadingPhytozome|Loading Phytozome data]]
mkatari-bioinformatics-august-2013.txt · Last modified: 2017/01/25 05:13 by mkatari