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minimap2-software [2018/11/04 16:04] – created aorthminimap2-software [2023/02/20 18:34] – aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest version: 2.13+  * Latest version: 2.24
   * Added: November, 2018   * Added: November, 2018
 +  * Updated: February, 2023
   * Link: https://lh3.github.io/minimap2/   * Link: https://lh3.github.io/minimap2/
  
 ===== Usage ===== ===== Usage =====
  
-See versions of minimap2 that are available:+See versions that are available:
 <code>$ module avail minimap2</code> <code>$ module avail minimap2</code>
  
 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load minimap2/2.13+<code>$ module load minimap2/2.24
 $ minimap2</code> $ minimap2</code>
  
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 <code>$ cd /tmp <code>$ cd /tmp
-$ wget https://github.com/lh3/minimap2/releases/download/v2.13/minimap2-2.13_x64-linux.tar.bz2 +$ wget https://github.com/lh3/minimap2/releases/download/v2.24/minimap2-2.24_x64-linux.tar.bz2 
-$ tar xf minimap2-2.13_x64-linux.tar.bz2 +$ tar xf minimap2-2.24_x64-linux.tar.bz2  
-$ sudo mkdir -p /export/apps/minimap2/2.13 +$ cd minimap2-2.24_x64-linux 
-$ sudo cp -r minimap2-2.13_x64-linux/* /export/apps/minimap2/2.13</code>+$ sudo mkdir -p /export/apps/minimap2/2.24/bin 
 +$ sudo cp README.md LICENSE.txt /export/apps/minimap2/2.24 
 +$ sudo cp paftools.js k8 minimap2 /export/apps/minimap2/2.24/bin</code>
minimap2-software.txt · Last modified: 2023/02/21 12:54 by aorth