Differences

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--- igvtools-software [2017/12/26 14:55] – created aorth
+++ igvtools-software [2017/12/26 15:05] (current) – aorth
@@ Line 5: / Line 5: @@
   * Latest Version: 2.3.98
-  * Updated: February, 2017
+  * Updated: December, 2017
   * Link: https://software.broadinstitute.org/software/igv
 ===== Usage =====
 See which versions of igvtools are available:
 <code>$ module avail igvtools</code>
@@ Line 15: / Line 14: @@
 Load one version into your environment and run it:
 <code>$ module load igvtools/2.3.98
-$ igv.sh</code>
+$ igvtools</code>
 ===== Installation ======
 Notes from the sysadmin during installation:
-<code>$ wget http://data.broadinstitute.org/igv/projects/downloads/2.4/IGV_2.4.5.zip
+<code>$ wget http://data.broadinstitute.org/igv/projects/downloads/2.3/igvtools_2.3.98.zip
-$ sudo mkdir -p /export/apps/igv/2.4.5
+$ unzip igvtools_2.3.98.zip
-$ sudo cp -r IGV_2.4.5/*  /export/apps/igv/2.4.5
+$ sudo mkdir -p /export/apps/igvtools/2.3.98
-$ sudo chmod -x /export/apps/igv/2.4.5/igv.{bat,command}</code>
+$ sudo cp -r IGVTools/* /export/apps/igvtools/2.3.98
+$ sudo chmod -x /export/apps/igvtools/2.3.98/*.bat /export/apps/igvtools/2.3.98/*.command</code>