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htslib-software [2025/03/03 07:02] aorthhtslib-software [2025/12/05 06:40] (current) aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest Version: 1.17+  * Latest Version: 1.22.1
   * Added: March, 2015   * Added: March, 2015
-  * Updated: March, 2025+  * Updated: December, 2025
   * Link: https://github.com/samtools/htslib   * Link: https://github.com/samtools/htslib
  
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 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load htslib/1.17+<code>$ module load htslib/1.22.1
 $ tabix $ tabix
 $ bgzip</code> $ bgzip</code>
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 <code>$ cd /tmp <code>$ cd /tmp
-$ wget https://github.com/samtools/htslib/releases/download/1.17/htslib-1.17.tar.bz2 +$ wget https://github.com/samtools/htslib/releases/download/1.22.1/htslib-1.22.1.tar.bz2 
-$ tar xf htslib-1.17.tar.bz2 +$ tar xf htslib-1.22.1.tar.bz2 
-$ cd htslib-1.17 +$ cd htslib-1.22.1 
-$ ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.17+$ ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.22.1
 $ make $ make
-$ sudo mkdir -p /export/apps/htslib/1.17 +$ sudo mkdir -p /export/apps/htslib/1.22.1 
-$ sudo chown aorth /export/apps/htslib/1.17+$ sudo chown aorth /export/apps/htslib/1.22.1
 $ make install $ make install
-$ sudo chown -R root:root /export/apps/htslib/1.17</code>+$ sudo chown -R root:root /export/apps/htslib/1.22.1</code>
  
-Note: as of 1.17 this is compiled on CentOS Stream 8.+Note: as of 1.22.1 this is compiled on CentOS Stream 9.
htslib-software.1740985361.txt.gz · Last modified: by aorth