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htslib-software [2017/05/04 09:20] – aorthhtslib-software [2017/10/28 14:15] – aorth
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 ===== Information ===== ===== Information =====
  
-  * Latest Version: 1.3.2+  * Latest Version: 1.6
   * Added: March, 2015   * Added: March, 2015
-  * Updated: February, 2017+  * Updated: Оctober, 2017
   * Link: https://github.com/samtools/htslib   * Link: https://github.com/samtools/htslib
  
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 === Load and run htslib === === Load and run htslib ===
-<code>$ module load htslib/1.3.2 </code>+<code>$ module load htslib/1.6</code>
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ cd /tmp +<code>$ wget https://github.com/samtools/htslib/releases/download/1.6/htslib-1.6.tar.bz2 
-$ wget -qO- "https://github.com/samtools/htslib/releases/download/1.3.2/htslib-1.3.2.tar.bz2" | tar xjv +$ tar xf htslib-1.6.tar.bz2 
-$ sudo mkdir /export/apps/htslib/1.3.2/ +$ cd htslib-1.6 
-$ sudo chown -R joguya:joguya /export/apps/htslib/1.3.2/ +$ sudo mkdir /export/apps/htslib/1.6 
-$ LD_LIBRARY_PATH=/export/apps/curl/7.47.1/lib:$LD_LIBRARY_PATH LDFLAGS="-L/export/apps/curl/7.47.1/lib" CFLAGS="-I/export/apps/curl/7.47.1/include" ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.3.2/+$ sudo chown aorth /export/apps/htslib/1.6 
 +$ scl enable devtoolset-4 bash 
 +$ ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.6
 $ make $ make
 $ make install $ make install
-$ sudo chown -R root:root /export/apps/htslib/1.3.2 +$ sudo chown -R root:root /export/apps/htslib/1.6</code>
-</code>+
htslib-software.txt · Last modified: 2022/06/23 09:29 by aorth