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--- htslib-software [2017/02/05 11:40] – joguya
+++ htslib-software [2017/10/28 14:15] – aorth
@@ Line 4: / Line 4: @@
 ===== Information =====
-  * Latest Version: 1.3.2
+  * Latest Version: 1.6
   * Added: March, 2015
-  * Updated: February, 2017
+  * Updated: Оctober, 2017
   * Link: https://github.com/samtools/htslib
@@ Line 15: / Line 15: @@
 === Load and run htslib ===
-<code>$ module load htslib/1.3.2 </code>
+<code>$ module load htslib/1.6</code>
 ===== Installation ======
 Notes from the sysadmin during installation:
-<code>cd /tmp
+<code>$ wget https://github.com/samtools/htslib/releases/download/1.6/htslib-1.6.tar.bz2
-$ wget -qO- "https://github.com/samtools/htslib/releases/download/1.3.2/htslib-1.3.2.tar.bz2" | tar xjv
+$ tar xf htslib-1.6.tar.bz2
-$ sudo mkdir /export/apps/htslib/1.3.2/
+$ cd htslib-1.6
-$ sudo chown -R joguya:joguya /export/apps/htslib/1.3.2/
+$ sudo mkdir /export/apps/htslib/1.6
-LD_LIBRARY_PATH=/export/apps/curl/7.47.1/lib:$LD_LIBRARY_PATH LDFLAGS="-L/export/apps/curl/7.47.1/lib" CFLAGS="-I/export/apps/curl/7.47.1/include" ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.3.2/
+$ sudo chown aorth /export/apps/htslib/1.6
+$ scl enable devtoolset-4 bash
+$ ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.6
 $ make
 $ make install
-$ sudo chown -R root:root /export/apps/htslib/1.3.2
+$ sudo chown -R root:root /export/apps/htslib/1.6</code>
-</code>