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htslib-software [2017/02/05 11:40] – joguyahtslib-software [2017/05/04 09:20] – aorth
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 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>cd /tmp+<code>$ cd /tmp
 $ wget -qO- "https://github.com/samtools/htslib/releases/download/1.3.2/htslib-1.3.2.tar.bz2" | tar xjv $ wget -qO- "https://github.com/samtools/htslib/releases/download/1.3.2/htslib-1.3.2.tar.bz2" | tar xjv
 $ sudo mkdir /export/apps/htslib/1.3.2/ $ sudo mkdir /export/apps/htslib/1.3.2/
 $ sudo chown -R joguya:joguya /export/apps/htslib/1.3.2/ $ sudo chown -R joguya:joguya /export/apps/htslib/1.3.2/
-LD_LIBRARY_PATH=/export/apps/curl/7.47.1/lib:$LD_LIBRARY_PATH LDFLAGS="-L/export/apps/curl/7.47.1/lib" CFLAGS="-I/export/apps/curl/7.47.1/include" ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.3.2/+$ LD_LIBRARY_PATH=/export/apps/curl/7.47.1/lib:$LD_LIBRARY_PATH LDFLAGS="-L/export/apps/curl/7.47.1/lib" CFLAGS="-I/export/apps/curl/7.47.1/include" ./configure --enable-plugins --enable-libcurl --prefix=/export/apps/htslib/1.3.2/
 $ make $ make
 $ make install $ make install
 $ sudo chown -R root:root /export/apps/htslib/1.3.2 $ sudo chown -R root:root /export/apps/htslib/1.3.2
 </code> </code>
htslib-software.txt · Last modified: 2022/06/23 09:29 by aorth