fasttree-software
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Table of Contents
FastTree
FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences. FastTree can handle alignments with up to a million of sequences in a reasonable amount of time and memory. For large alignments, FastTree is 100-1,000 times faster than PhyML 3.0 or RAxML 7.
Information
- Version: 2.1.11
- Added: May, 2020
Usage
See which versions of fasttree are available:
$ module avail fasttree
Load one version into your environment and run it:
$ module load fasttree/2.1.11 $ FastTree
Installation
Notes from the sysadmin during installation:
$ sudo mkdir -p /export/apps/fasttree/2.1.11/bin $ sudo wget http://www.microbesonline.org/fasttree/FastTree -O /export/apps/fasttree/2.1.11/bin/FastTree
fasttree-software.1588618797.txt.gz · Last modified: 2020/05/04 18:59 by aorth