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--- fastqc-software [2014/12/05 14:07] – created aorth
+++ fastqc-software [2017/02/05 09:37] – joguya
@@ Line 4: / Line 4: @@
 ===== Information =====
-  * Version: 0.11.2
+  * Latest version: 0.11.5
   * Added: December, 2014
+  * Updated: February, 2017
   * Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
@@ Line 14: / Line 15: @@
 === Load and run ===
-<code>$ module load fastqc/0.11.2
+<code>$ module load fastqc/0.11.5
 $ fastqc</code>
@@ Line 20: / Line 21: @@
 Notes from the sysadmin during installation:
-<code>$ cd ~/src
+<code>
-$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.2.zip
+$ cd /tmp
-$ unzip fastqc_v0.11.2.zip
+$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.5.zip
-$ sudo cp -r FastQC/ /export/apps/fastqc/0.11.2
+$ unzip fastqc_v0.11.5.zip
-$ sudo chmod +x /export/apps/fastqc/0.11.2/fastqc</code>
+$ cd FastQC/
+$ sed -i 's#/usr/bin/perl#/usr/bin/env perl#' fastqc
+$ chmod +x fastqc
+$ sudo mkdir /export/apps/fastqc/0.11.5/
+$ sudo cp -r . /export/apps/fastqc/0.11.5/
+</code>