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fastqc-software [2014/12/05 14:07]
aorth created
fastqc-software [2017/02/05 09:37]
joguya
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 ===== Information ===== ===== Information =====
  
-  * Version: 0.11.2+  * Latest version: 0.11.5
   * Added: December, 2014   * Added: December, 2014
 +  * Updated: February, 2017
   * Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/   * Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
  
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 === Load and run === === Load and run ===
-<code>$ module load fastqc/0.11.2+<code>$ module load fastqc/0.11.5
 $ fastqc</code> $ fastqc</code>
  
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 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ cd ~/src +<code> 
-$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.2.zip +$ cd /tmp 
-$ unzip fastqc_v0.11.2.zip +$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.5.zip 
-sudo cp -r FastQC/ /export/apps/fastqc/0.11.2 +$ unzip fastqc_v0.11.5.zip 
-$ sudo chmod +x /export/apps/fastqc/0.11.2/fastqc</code>+cd FastQC/ 
 +$ sed -i 's#/usr/bin/perl#/usr/bin/env perl#' fastqc 
 +$ chmod +x fastqc 
 +$ sudo mkdir /export/apps/fastqc/0.11.5/ 
 +$ sudo cp -r . /export/apps/fastqc/0.11.5/ 
 +</code>
fastqc-software.txt · Last modified: 2021/12/15 07:39 by aorth