A quality control tool for high throughput sequence data.

• Latest version: 0.11.9
• Added: December, 2014
• Updated: December, 2021
• Link: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/

See versions of fastqc which are available:

$ module avail fastqc

Load one version into your environment and run it:

$ module load fastqc/0.11.9
$ fastqc

Notes from the sysadmin during installation:

$ cd /tmp
$ wget http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.11.9.zip
$ unzip fastqc_v0.11.9.zip
$ sudo cp -r FastQC /export/apps/fastqc/0.11.9
$ sudo chmod +x /export/apps/fastqc/0.11.9/fastqc