ClonalFrame infers bacterial microevolution using multilocus sequence data.

• Version: 1.2
• Added: September, 2015
• Link: http://www.xavierdidelot.xtreemhost.com/clonalframe.htm

See versions of ClonalFrame which are available:

$ module avail clonalframe

Load and run ClonalFrame:

$ module load clonalframe/1.2
$ ClonalFrame

Notes from the sysadmin during installation:

$ cd /tmp
$ scl enable devtoolset-2 bash
$ wget http://www.stats.ox.ac.uk/~didelot/files/ClonalFrame-1.2-Lin.zip
$ unzip ClonalFrame-1.2-Lin.zip
$ chmod 0755 ClonalFrame
$ sudo mkdir -p /export/apps/clonalframe/1.2
$ sudo cp ClonalFrame /export/apps/clonalframe/1.2/