changeo-software
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Table of Contents
Change-O
Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin sequences, and reconstructing germline sequences.
Information
- Version: 0.3.3
- Added: September, 2016
Usage
See which versions of changeo are available:
$ module avail changeo
Load changeo
$ module load changeo/0.3.3
Installation
Notes from the sysadmin during installation:
1$ cd /tmp $ wget -qO - https://bitbucket.org/kleinstein/changeo/downloads/changeo-0.3.3.tar.gz | tar -xzv $ chown -R joguya:joguya /export/apps/python/3.4.3/ $ cd changeo-0.3.3/ $ module load python/3.4.3 $ scl enable devtoolset-2 bash $ sudo mkdir -p /export/apps/changeo/0.3.3/ $ sudo chown -R joguya:joguya /export/apps/changeo/0.3.3/ $ python setup.py build $ python setup.py install --install-scripts=/export/apps/changeo/0.3.3/bin $ sudo chown -R root:root /export/apps/changeo/0.3.3/ /export/apps/python/3.4.3/
changeo-software.1473502294.txt.gz · Last modified: 2016/09/10 10:11 by joguya