Tuesday 11 November, 2014
All Course material and resources taught on this day shall be uploaded here
Introduction to EBioKit
Introduction to wEMBOSS
Emboss-Practical
More notes on wEMBOSS
BLAST Lecture
Additional BLAST Material
NUCLEOTIDE SEQUENCE
>gi|8547324|gb|AF271385.1| Fasciola hepatica cathepsin L mRNA, complete cds
GGGCAAACAATGAGATTGGTAATCCTAACCCTACTCATCGTCGGAGTGTTCGCCTCAAATGACGATTTGT
GGCATCAATGGAAGCGAATTTACAATAAAGAATACAATGGAGCTGACGATGACCACAGGAGAAATATTTG
GGAACAAAATGTGAAACATATCCAAGAACACAACCTGCGCCACGATCTCGGTCTCGTCACCTACAAGTTG
GGATTGAACCAATTCACCGATATGACATTCGAGGAATTCAAAGCCAAATATCTAACAGAAATGCCACGCG
CGTCTGAGTTACTCTCACACGGTATCCCATATAAGGCTAACAAGCGTGCTGTACCCGACAGAATTGACTG
GCGTGAATCCGGTTATGTGACGGAGGTGAAAGATCAGGGAGGCTGTGGTTCTTGTTGGGCTTTCTCAACA
ACAGGTGCTATGGAAGGACAGTATATGAAAAACCAAAGAACTAGTATTTCATTCTCTGAACAACAACTGG
TCGATTGTAGCCGTGATTTTGGCAATTATGGTTGTAATGGTGGACTAATGGAAAATGCATACGAATATTT
GAAACGATTTGGATTGGAAACCGAGTCTTCTTATCCTTACAGGGCTGTGGAAGGACAGTGTCGATACAAC
GAGCAGTTGGGAGTTGCCAAAGTGACTGGCTACTATACGGTACATTCTGGAGATGAGGTAGAATTGCAAA
ATCTAGTCGGTGCCGAAGGACCTGCTGCGGTCGCTTTGGATGTGGAGTCAGACTTCATGATGTACAGGAG
TGGTATTTATCAGAGCCAAACTTGTTCACCGGATCGTTTGAACCATGGAGTGTTGGCTGTCGGTTATGGA
ATACAGGATGGTACTGACTACTGGATTGTGAAAAACAGTTGGGGAACGTGGTGGGGTGAGGACGGTTACA
TTCGAATGGTTAGGAAAAGAGGTAACATGTGTGGAATTGCTTCTCTGGCCAGTGTCCCGATGGTGGCACA
ATTTCCGTGA
PROTEIN SEQUENCE
MEMKPKYDPREVEAGRYEEWVKNGYFKPSEDKSKETYTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRM
QGYDTLYLPGMDHAGIATQAKVEAKLNEQGITRYDLGREKFLEQAWDWKEEYASFIRAQWAKLGLGLDYS
RERFTLDEGLSKAVKKVFVDLYNKGIIYRGERIINWDPKARTALSDIEVIHEDVQGAFYHFKYPYADGEG
FIEIATTRPETMLGDTAIVVNPNDERYKDVIGKTVILPIVGRELPILADEYVDIDFGSGAMKVTPAHDPN
DFEIGQRHQLENIIVMDENGKMNNKAGKYEGMDRFDCRKQLVEDLKEQDLVIKIEDHVHSVGHSERSGAV
VEPYLSTQWFVRMEDLAKRSLDNQKTDDRIDFYPQRFEHTFNQWMENIRDWTISRQLWWGHQIPAWYHKE
TGEIYVGEEAPTDIENWQQDEDVLDTWFSSALWPFSTLGWPDLESEDFKRYYPTNALVTGYDIIFFWVAR
MIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIDEYGADSLRYFLATGSSPGHDLRYS
TEKVESVWNFINKIWNGARFSLMNIGEDFKVEDIDLSGNLSLADKWILTRLNETIATVTDLSDKYEFGEV
GRTLYNFIWDDFCDWYIEMSKIPMNGNDEEQKQVTRSVLSYTLDNIMRMLHPFMPFVTEKIWQSLPHEGE
TIVKASWPEVRESLIFEESKQTMQQLVEIIKSVRQSRVEVNTPLSKEIPILIQAKDKEIETTLSQNKDYL
IKFCNPSTLNISTDVEIPEKAMTSVVIAGKVVLPLEGLIDMDKEISRLEKELAKLQSELDRVDKKLSNEN