Bamtools provides C++ API & command-line toolkit for working with BAM data.

• Version: 2.4.0
• Added: February, 2016
• Link: https://github.com/pezmaster31/bamtools

See which versions of bamtools are available:

$ module avail bamtools

Load bamtools

$ module load bamtools/2.4.0

Notes from the sysadmin during installation:

$ cd /tmp
$ wget https://github.com/pezmaster31/bamtools/archive/v2.4.0.tar.gz
$ tar -xvf v2.4.0.tar.gz
$ cd bamtools-2.4.0/
$ mkdir build
$ cd build
$ cmake ..
$ make
$ rm -rf build
$ sudo mkdir -p /export/apps/bamtools/2.4.0/
$ sudo cp -r . /export/apps/bamtools/2.4.0/