User Tools

Site Tools


augustus-software

This is an old revision of the document!


Augustus

Augustus predicts genes in eukaryotic genomic sequences.

Information

Usage

See which versions of augustus are available:

$ module avail augustus

Load augustus

$ module load augustus/3.2.1

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ cd /tmp
$ wget http://bioinf.uni-greifswald.de/augustus/binaries/augustus-3.2.1.tar.gz
$ tar -xvf augustus-3.2.1.tar.gz
$ cd augustus-3.2.1
$ sed -i 's/^#ZIPINPUT/ZIPINPUT/g' common.mk
$ cd src
$ make
$ cd ../
$ sudo mkdir -p /export/apps/augustus/3.2.1/
$ sudo cp -r . /export/apps/augustus/3.2.1/
augustus-software.1455688206.txt.gz · Last modified: 2016/02/17 05:50 by joguya