augustus-software
Differences
This shows you the differences between two versions of the page.
Next revision | Previous revision | ||
augustus-software [2016/02/17 05:50] – created joguya | augustus-software [2018/01/07 15:40] (current) – aorth | ||
---|---|---|---|
Line 4: | Line 4: | ||
===== Information ===== | ===== Information ===== | ||
- | * Version: 3.2.1 | + | * Version: 3.3 |
- | * Added: | + | * Added: |
* Link: http:// | * Link: http:// | ||
Line 14: | Line 14: | ||
</ | </ | ||
- | Load augustus | + | Load one version into your environment: |
- | < | + | < |
===== Installation ====== | ===== Installation ====== | ||
Line 21: | Line 21: | ||
< | < | ||
- | $ cd /tmp | + | $ wget http:// |
- | $ wget http:// | + | $ tar xf augustus-3.3.tar.gz |
- | $ tar -xvf augustus-3.2.1.tar.gz | + | $ cd augustus |
- | $ cd augustus-3.2.1 | + | $ sed -i ' |
- | $ sed -i 's/^# | + | $ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/ |
- | $ cd src | + | $ sed -i ' |
+ | $ sed -i ' | ||
+ | $ sudo yum install boost-devel | ||
+ | $ make clean | ||
$ make | $ make | ||
- | $ cd ../ | + | $ sudo mkdir /export/ |
- | $ sudo mkdir -p / | + | $ sudo chown aorth / |
- | $ sudo cp -r . / | + | $ make INSTALLDIR=/ |
- | </ | + | $ find /export/ |
+ | $ find / | ||
+ | $ find / | ||
+ | $ find / | ||
+ | $ sudo chown -R root:root / | ||
+ | Augustus requires bamtools at compile time (but not during run time). |
augustus-software.txt · Last modified: 2018/01/07 15:40 by aorth