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velvet-software [2014/05/27 09:58] – created aorthvelvet-software [2025/05/06 08:52] (current) aorth
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 ===== Information ===== ===== Information =====
  
-  * Added: November 15, 2012 +  * Version: 1.2.10 
-  * Updated: May 272014 +  * Added: November, 2012 
-  * Link: https://www.ebi.ac.uk/~zerbino/velvet/+  * Updated: May, 2025 
 +  * Link: https://github.com/dzerbino/velvet
  
 ===== Usage ===== ===== Usage =====
 +
 +See versions which are available:
 +<code>$ module avail velvet</code>
 +
 +Load one version into your environment and run it:
 +<code>$ module load velvet/1.2.10
 +$ velvetg</code>
 +
 +=== Extra information ===
 +  * https://wiki.hpcc.msu.edu/display/Bioinfo/Velvet+and+Oases
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code></code>+<code>$ wget https://github.com/dzerbino/velvet/archive/refs/tags/v1.2.10.tar.gz 
 +$ tar xf v1.2.10.tar.gz  
 +$ cd velvet-1.2.10 
 +$ make OPENMP=1 
 +$ make cleanobj 
 +$ sudo cp -r . /export/apps/velvet/1.2.10</code>
velvet-software.1401184717.txt.gz · Last modified: 2014/05/27 09:58 by aorth